Bioinformatics Services at Ayass BioScience, LLC Larisa
Next Generation Sequencing Data Analysis
Our experienced bioinformatics specialists can help with any type of data analysis related to NGS. All these services can be customized depending on your requirements. The number of hours required for your project, specific objectives, and defined deliverables will be estimated during the initial consultation.
Sequence Quality control, e.g. adapter trimming
Read alignment: mapping sequencing reads to the reference genome
Peak calling: identify binding sites of the protein of interest
Microbial genomics if reference genome is available
Pathway enrichment analysis(GSEA)
A common approach to interpreting gene expression data is gene set enrichment analysis based on the functional annotation of the differentially expressed genes. We can help with gene set enrichment and pathway analysis using online open source and commercial tools listed below. We also offer Network analysis in complementary to pathway analysis.
Ingenuity (licence required)
Aligning a pair of or multiple short sequences, molecular phylogenetics, sequence-based database searching, aligning a pair of or multiple genomes, multi-locus sequence typing and gene/protein clustering.
Analysis of epigenetic modifications, e.g. from methylation/chromatin data
Variant calling and variant annotation
RNA Seq analysis
Our bioinformatics team can help with transcriptome analysis (RNA-Seq projects), including expression analysis and isoform detection.
Integration of SNP / polymorphism data
Integration with new genomics tools (epigenetics, chromatin structure)
Identification of relevant data in public repositories
Normalization of diverse datasets
Data formatting and updates
Computational assistance with experimental design
Statistical Analysis Services
Logical checks of data
Tests of hypotheses
Development of statistical models
Testing of statistical assumptions for tests and models
Plots illustrating the results of analyses
Help with drafting abstracts, talks, posters, and manuscripts
Significance testing through randomization / numerical simulations
Designing Panel for Agena
Customized pharmacogenomics, cancer panels
Custom panel for small scale clinical use
If you have any questions about Bioinformatics Services at Ayass BioScience, LLC, please call today at 972-668-6005 or fill out our contact form on the bottom of this page. We will answer any question you might have.